rsync(1)
to update a backup directory. This will copy any new files based on timestamp (not checksum) and remove any files that are no longer in the original directory:
# rsync -avh --stats --delete /home/username/data/ /backup/home/user/data/
Note that different versions of rsync(1) may treat the last forward slash in either paths differently. Some require it, some don't. Make sure to check first.
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